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Impurity Profiling Suite™

Assess the Safety Profile of Pharmaceutical Impurities

Predict genotoxic and carcinogenic endpoints to meet ICH M7(R2) guidelines.
 

Impurity Profiling Suite

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Support Confident Impurity Risk Assessment

Predict toxicological endpoints from chemical structure to support ICH M7(R2) workflows. Developed through a collaborative agreement with the US Food and Drug Administration (FDA), Impurity Profiling Suite helps prepare regulatory submissions with confidence.

Determine the ICH M7(R2) classification for impurities and degradants.

Identify potentially hazardous structural fragments responsible for genotoxic and carcinogenic activity.

Gain insight into the possible mechanisms of toxic effects.

Assess the reliability of predictions.

Benefits

Why Choose Impurity Profiling Suite?

Make Data-Driven Decisions with Confidence

  • Classify structures according to ICH M7(R2) guidelines for your review
  • Review the supporting evidence behind each classification, with recommendations for appropriate control measures
  • Assess the toxicity of single compounds or compound series to prioritize further evaluation

Trust in Reliable Predictions

  • Predictions are based on curated public and regulatory data (provided by the FDA)
  • The expert system identifies 67 literature-derived toxicophore alerting groups associated with genotoxic and carcinogenic mechanisms
  • Evaluate prediction reliability using a reliability index, similar structures, and literature references

Compliant with the ICH M7(R2) Guidelines

  • Includes both a probabilistic and knowledge-based models
  • Models follow OECD validation principles
  • A weight of evidence (WOE) approach provides information when experimental data are inconclusive
  • Results are accepted by the FDA, European Medicines Agency (EMA), and other regulatory agencies

How it Works

Toxicity Data for Expert Review in 
Seconds with Impurity Profiling Suite

 

 

  1. Draw/import your structure(s)
  2. Review results and make decisions
  3. Report your assessment to PDF

Features of Impurity Profiling Suite

  • Calculate toxicity endpoints for organic molecules from structure (draw in-app, or copy/paste from third-party drawing packages); SMILES string; InChI code; imported MOL, SK2, SKC, or CDX files; or search by name in the built-in dictionary
  • Automatic detection of tautomeric forms (for applicable prediction modules)
    • Select the canonical or major form
  • See the ICH M7(R2) classification* for your compound. The software provides the following classifications based on experimental data and QSAR predictions:
    • Class 1—Known carcinogen
    • Class 2—Known mutagen
    • Class 3—Alerting/potentially hazardous structure
    • Class 5—No alerts or sufficient data for lack of mutagenicityWhen a conclusive classification cannot be made, ICH M7 Class is reported as Inconclusive
    • *Class 4 assignments for parent-derivative relationships are not provided by the software at this time
  • When a definitive classification cannot be made from experimental data alone, you are provided with an evaluation based on a weight of evidence (WOE) approach involving:
    • The probability of hazardous effects reported by statistical models and confidence of predictions
    • Presence of alerting groups known from the literature
    • Evidence from experimental data for the most similar compounds from the built-in database
    • Other mitigating factors
  • Structure highlighting to indicate the alerting group/sub-structure
  • View a full list of alerting groups and hazardous fragments in the structure along with:
    • Statistical data about positive and negative compounds with that group/fragment
    • Z score indicating statistical significance that the fragment contributes to a positive test in the assay
    • Description of the mechanism of action and literature references
  • Results from the probabilistic model are presented as a Tree
    • Individual nodes corresponding to particular endpoints are grouped into higher level nodes according to a species/test system and mechanism of action. Information for each endpoint includes:
    • p-value—probability that a compound will result in a positive test in the respective assay
    • Coverage—an indication of whether or not the compound belongs to the Model Applicability Domain according to the calculated reliability index (RI) value
    • Call—“+” or “-“ indicates the compound can be reliably classified as Positive or Negative in that assay on the basis of p and RI values; undefined when it cannot be reliably classified
    • See the 5 most similar structures in the training set with name, CAS number, and experimental results (positive or negative, quantitative TD50 value, and tumor target sites in case of carcinogenicity)
  • Calculate toxicological endpoints for libraries of compounds and use built-in tools to sort, filter, plot, and rank results
    • Set user-defined label colors
    • Filter results numerically
    • Sort results by ascending/descending values
  • Retrieve results of previously calculated values in your activity history
  • Report ICH M7(R2) assessments or other results to PDF or copy/paste to your application of choice
  • Add custom models/algorithms by connecting to an existing web service using an XML protocol, or in the form of a DLL (available in thin client deployments only)

What Our Customers Say About Impurity Profiling Suite

Quote from Yao Xiaohua

“We used the analysis results of Percepta Impurity Profiling Suite as evidence for submissions to regulators in China and abroad for acceptance”

Yao Xiaohua A pharma company, China

Impurity Profiling Suite FAQs

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Beyond impurity assessments

Explore the full predictions capabilities of Percepta Suite from pKa and logP calculations to full ADME and tox assessments.

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